This comparison whant to clear up the main differencies on the flight controller. Those are POTENIAL capability of the flight controller, but there are some thing to keep in mind:
So my opinion is to buy the best HW with active development and lot of user. Bonus point if it is supported by multiple project and its openharware, as this helps a lot the development of alternative software and hardware.
(* main bus used to talk with Gyroscope and Accelerometer)